Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950480.1_cds_XP_016490904.1_81280
CDS Infomation

[gene=LOC107810620] [db_xref=GeneID:107810620] [protein=ATP-dependent DNA helicase PIF7-like] [protein_id=XP_016490904.1] [location=join(39618..41015,43754..43802,44136..44593)] [gbkey=CDS]
Sequence

ATGCCAAGGCCTGTTTATAATACGGAAGAAGTTGATAGCAATAATAGATTAATACGGGAT
GAATTGCGTTATAATAAACGCGCTTTGGCAGAGGAACATCAACAATTAGTAAAGAATTTG
ACAGATGAGCAAAAGTCAGTTTATGAAAAAATAATAAGAGATGTGAATAAAGACAAAGGT
GGGTTTTTCTTTTTATATGGTTTTGGAAGAACGGACAAGACTTTTATTTGGAGAACTCTA
ACTTCTGCCATAAGATCTAGAGGAGATATTGTCTTAACTGTTGCATCTAGTGGGATTGCA
TCTTTGTTGTTACCAGGTGGTCGAACAACTCATTCAAGATTTGTGATTCCTCTAAATGTA
ACTGAAGATTCAACATGTAATATAAAGCAAGTTACTCCTTTATCAAATTTAATTATTAAG
GCAAAATTGATTATCTGGGATGAGGCACCCATGATGCATAGATATTGTTTTGAAGCTCTT
GATAAAACTTTAAGAGATATTCTTAGGTTTAAAGATGCATCCAATTTACACCGACCATTT
GGAGGTAAAACAATTGTTCTTGGTGGTGACTTCAGACAAATATTACCTGTCATTCCAAAA
GGTAGTAGGCAAGATATTGTTAATGCTTCTCTCAATTCTTCTTATTTGTGGCCTCACTGT
CAACTGTTAAAGTTAACAAAGAACATGAGATTGCAAGGTAATGAAATAGGGACACATCTA
GATGAGTTGAGAGTTTTTTCAGATTGGATTTTGGCAATTGGCGATGGTATAGTTGGTACT
TCTGTTGATGGCAATGAAAAAGTCCAAATACCAGATGATCTTTTGATAAAACAATCCGTT
GATCCAACATCTGCAATTGTAGAAAGTATGTATCCGAATTTCAACAGTCGTTGCAATGAT
ATAGGATACCTACAACAAAGAGCCTTTCTTACTCCAACTATTGATATGGTGGAATCAATC
AACGAATATATGATTTCCCTTAATGAAAGTTCTGAGAAATCATATTTGAGTTCCGATACA
ATCTGCAACTCTGACAGTACTTATTCAGCACTGGAACATGTACACACTCCTGAATTCTTA
AATACAATTAAATGTTCTGGAGTTCCAAATCATGCTCTTACGCTAAAGGTTAGTATTCCA
GTAATGTTATTAAGAAATATTGATAAGTCAGCAGGATTATGTAATGGAACAAGGTTGATC
ATAACTAAACTTGGAAATCAAGTTATTGAAGCAAAGGTTTTAGCAGGACAGATGGCTGGA
CAGAAAGTGTTTATTCCAAGAATGACATTGACGCCATCTGATGCTAGAATTCCATTCAAG
TTCCAGCGAAGACAATTTCCAATCATTGTATCTTTTGCCATGACAATCAACAAAAACCAA
GGACAGTCATTGTCTCACACTGCTATTGGAATTGCATTTGGCGTATACATAATTACTGGA
CTTTTGGATAATAAACAAGGAGAACTTCCAATTACTACAACTGCGACTTCTCGAAGTCAA
GGAACGAGACAACGTAGAAGGGTACGTCGTCGCAGCATTTATTCGTATAATGATTCTGAC
TCTAAGGCTGAAGTCATTAGGATTCTCCCAAGGCCAATACAAAATAAGTTAAGGGATCGA
AGGGCTGAACGAAGGGAAAGAGAAAAGAAATTTAGAGAGCTTAGGGCTTCACTAGCTAAA
TATATTGAAAATTATAAGTTTACCCGAGATGCACTAATTGATGCTATTGACCAAAATAAA
CTATCTGATTGGAAAGCCTTAACAATATTACTAGATTCACCTGGACAACCTTTAGGTAGT
ATTTTAACTGATGTTTATCACGAGGTTTGGCCAAGTGAACCTTTTTGGGTTTATGTTCTT
AAATTTGAAGCTGAGTGGGAGAACCGTTTGTACAACTATTTGTAA

Peptide Sequence

PEP ID

XP_016490904.1
PEP Infomation

PREDICTED: ATP-dependent DNA helicase PIF7-like [Nicotiana tabacum]
Sequence

MPRPVYNTEEVDSNNRLIRDELRYNKRALAEEHQQLVKNLTDEQKSVYEKIIRDVNKDKG
GFFFLYGFGRTDKTFIWRTLTSAIRSRGDIVLTVASSGIASLLLPGGRTTHSRFVIPLNV
TEDSTCNIKQVTPLSNLIIKAKLIIWDEAPMMHRYCFEALDKTLRDILRFKDASNLHRPF
GGKTIVLGGDFRQILPVIPKGSRQDIVNASLNSSYLWPHCQLLKLTKNMRLQGNEIGTHL
DELRVFSDWILAIGDGIVGTSVDGNEKVQIPDDLLIKQSVDPTSAIVESMYPNFNSRCND
IGYLQQRAFLTPTIDMVESINEYMISLNESSEKSYLSSDTICNSDSTYSALEHVHTPEFL
NTIKCSGVPNHALTLKVSIPVMLLRNIDKSAGLCNGTRLIITKLGNQVIEAKVLAGQMAG
QKVFIPRMTLTPSDARIPFKFQRRQFPIIVSFAMTINKNQGQSLSHTAIGIAFGVYIITG
LLDNKQGELPITTTATSRSQGTRQRRRVRRRSIYSYNDSDSKAEVIRILPRPIQNKLRDR
RAERREREKKFRELRASLAKYIENYKFTRDALIDAIDQNKLSDWKALTILLDSPGQPLGS
ILTDVYHEVWPSEPFWVYVLKFEAEWENRLYNYL

Transcript Sequence

Gene sequence data has not been registered.